EnhancerDB
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  3. rs574938533[chr17:55687811]
Enhancers that have rs574938533[chr17:55687811]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs574938533[chr17:55687811]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55687806 55687821 MEF2C JASPAR yes 54975123
chr17 55687809 55687824 FOXP1 JASPAR yes 54975124
chr17 55687810 55687816 TBP TRANSFAC yes 54975125
chr17 55687810 55687825 FOXP1 JASPAR yes 54975126
chr17 55687811 55687826 FOXP1 JASPAR yes 54975127
Genes associated with rs574938533[chr17:55687811], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More