EnhancerDB
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  3. rs575090316[chr16:88058845]
Enhancers that have rs575090316[chr16:88058845]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88040585 88061035 enh4183
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (A549) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Stomach
chr16 88058800 88059189 vista23478
VISTA
Transcript factors that have rs575090316[chr16:88058845]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88058581 88059073 CTCF UCSC Txn Factor no Conserved 108221776
chr16 88058790 88059393 TCF7L2 GTRD no Colon (HCT116) 108221778
chr16 88058820 88061458 ZNF143 GTRD no Epithelial (MCF-7) 108221779
chr16 88058834 88058845 NFKB1 JASPAR yes 12257779
chr16 88058834 88058845 NFKB1 JASPAR yes 49416644
chr16 88058837 88058852 STAT1 JASPAR yes 12257780
chr16 88058837 88058852 STAT1 JASPAR yes 49416645
chr16 88058838 88058847 ELK4 JASPAR yes 12257781
chr16 88058838 88058847 ELK4 JASPAR yes 49416646
chr16 88058839 88058845 ETS1 JASPAR yes 12257782
chr16 88058839 88058845 ETS1 JASPAR yes 49416647
chr16 88058839 88058849 ELK1 JASPAR yes 12257783
chr16 88058839 88058849 ELK1 JASPAR yes 49416648
chr16 88058839 88058850 STAT1 JASPAR yes 12257784
chr16 88058839 88058850 STAT1 JASPAR yes 49416649
chr16 88058844 88058854 HMBOX1 JASPAR yes 12257785
chr16 88058844 88058854 HMBOX1 JASPAR yes 49416650
Genes associated with rs575090316[chr16:88058845], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More