EnhancerDB
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  3. rs575252462[chr2:204448146]
Enhancers that have rs575252462[chr2:204448146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 204433605 204453715 enh6121
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
Transcript factors that have rs575252462[chr2:204448146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 204448128 204448149 IRF1 JASPAR yes 80242456
chr2 204448132 204448146 IRF7 JASPAR yes 80242459
chr2 204448134 204448155 IRF1 JASPAR yes 80242460
chr2 204448136 204448151 PRDM1 JASPAR yes 80242461
Genes associated with rs575252462[chr2:204448146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More