EnhancerDB
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  3. rs575297080[chr18:51916381]
Enhancers that have rs575297080[chr18:51916381]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51910465 51921195 enh4845
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs575297080[chr18:51916381]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51916291 51916798 ZNF274 GTRD no Liver (HepG2) 21823038
chr18 51916310 51916753 ZNF274 GTRD no Liver (HepG2) 21823039
chr18 51916325 51916755 ZNF274 GTRD no Liver (HepG2) 21823040
chr18 51916364 51916384 RREB1 JASPAR yes 110714916
chr18 51916365 51916385 RREB1 JASPAR yes 110714917
chr18 51916367 51916387 RREB1 JASPAR yes 110714918
chr18 51916369 51916389 RREB1 JASPAR yes 110714920
chr18 51916371 51916391 RREB1 JASPAR yes 110714921
chr18 51916372 51916386 PLAG1 JASPAR yes 110714922
chr18 51916372 51916392 RREB1 JASPAR yes 110714923
chr18 51916374 51916388 GLIS2 JASPAR yes 110714924
chr18 51916374 51916388 GLIS3 JASPAR yes 110714925
chr18 51916376 51916386 ZNF740 JASPAR yes 110714926
chr18 51916378 51916388 ZNF740 JASPAR yes 110714927
chr18 51916380 51916390 SP1 JASPAR yes 110714928
Genes associated with rs575297080[chr18:51916381], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More