EnhancerDB
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  3. rs575339130[chr4:1046867]
Enhancers that have rs575339130[chr4:1046867]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 1021365 1049299 enh36295
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs575339130[chr4:1046867]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 1046854 1046869 TFAP2A JASPAR yes 87794191
chr4 1046854 1046869 TFAP2C JASPAR yes 87794192
chr4 1046857 1046869 TFAP2A JASPAR yes 87794193
chr4 1046857 1046869 TFAP2B JASPAR yes 87794194
chr4 1046857 1046869 TFAP2C JASPAR yes 87794195
chr4 1046857 1046872 TFAP2A JASPAR yes 87794196
chr4 1046857 1046872 TFAP2C JASPAR yes 87794197
chr4 1046858 1046867 TFAP2A JASPAR yes 87794198
chr4 1046859 1046868 TFAP2A JASPAR yes 87794199
chr4 1046864 1046868 LFA1 TRANSFAC yes 87794200
Genes associated with rs575339130[chr4:1046867], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More