EnhancerDB
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  3. rs575346217[chr17:75342013]
Enhancers that have rs575346217[chr17:75342013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575346217[chr17:75342013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75341999 75342014 FOXP1 JASPAR yes 56070082
chr17 75342001 75342021 RREB1 JASPAR yes 56070085
chr17 75342004 75342024 RREB1 JASPAR yes 56070086
chr17 75342008 75342014 TCF4 TRANSFAC yes 56070087
chr17 75342009 75342029 RREB1 JASPAR yes 56070088
chr17 75342010 75342031 IRF1 JASPAR yes 56070089
chr17 75342011 75342026 FOXP1 JASPAR yes 56070090
Genes associated with rs575346217[chr17:75342013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More