EnhancerDB
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  3. rs575354771[chr18:56214367]
Enhancers that have rs575354771[chr18:56214367]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575354771[chr18:56214367]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56214363 56214376 EOMES JASPAR yes 110957447
chr18 56214364 56214371 GATA3 TRANSFAC yes 110957448
chr18 56214364 56214372 GATA5 JASPAR yes 110957449
chr18 56214365 56214375 TBR1 JASPAR yes 110957450
chr18 56214365 56214376 TBX20 JASPAR yes 110957451
chr18 56214366 56214376 TBX21 JASPAR yes 110957452
chr18 56214367 56214370 MYB TRANSFAC yes 110957453
chr18 56214367 56214375 MGA JASPAR yes 110957454
chr18 56214367 56214375 TBX15 JASPAR yes 110957455
chr18 56214367 56214375 TBX1 JASPAR yes 110957456
chr18 56214367 56214375 TBX4 JASPAR yes 110957457
chr18 56214367 56214375 TBX5 JASPAR yes 110957458
Genes associated with rs575354771[chr18:56214367], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More