EnhancerDB
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  3. rs575405029[chr1:55326797]
Enhancers that have rs575405029[chr1:55326797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs575405029[chr1:55326797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55326535 55327151 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805356
chr1 55326759 55327199 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805357
chr1 55326761 55327325 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805358
chr1 55326784 55326799 RFX5 JASPAR yes 29001992
chr1 55326795 55326808 SMAD2 JASPAR yes 29001993
Genes associated with rs575405029[chr1:55326797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More