EnhancerDB
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  3. rs575460407[chr4:8189753]
Enhancers that have rs575460407[chr4:8189753]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 8181827 8200055 enh21355
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs575460407[chr4:8189753]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 8189744 8189756 PBX1 JASPAR yes 88164449
chr4 8189749 8189762 EOMES JASPAR yes 88164450
chr4 8189751 8189761 TBR1 JASPAR yes 88164451
chr4 8189752 8189762 TBX21 JASPAR yes 88164452
chr4 8189752 8189771 PAX5 JASPAR yes 88164453
chr4 8189753 8189761 MGA JASPAR yes 88164454
chr4 8189753 8189761 TBX15 JASPAR yes 88164455
chr4 8189753 8189761 TBX1 JASPAR yes 88164456
chr4 8189753 8189761 TBX4 JASPAR yes 88164457
chr4 8189753 8189761 TBX5 JASPAR yes 88164458
Genes associated with rs575460407[chr4:8189753], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More