EnhancerDB
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  3. rs575473490[chr12:52425725]
Enhancers that have rs575473490[chr12:52425725]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52415565 52430755 enh2354
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs575473490[chr12:52425725]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52425718 52425727 SNAI2 JASPAR yes 120914428
chr12 52425718 52425728 ID4 JASPAR yes 120914429
chr12 52425718 52425728 TCF3 JASPAR yes 120914430
chr12 52425718 52425728 TCF4 JASPAR yes 120914431
chr12 52425723 52425732 HIC2 JASPAR yes 120914432
Genes associated with rs575473490[chr12:52425725], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More