EnhancerDB
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  3. rs575525346[chr5:176412000]
Enhancers that have rs575525346[chr5:176412000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 176410422 176427455 enh8889
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Uterus Stomach
Transcript factors that have rs575525346[chr5:176412000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 176411989 176412004 HNF4A JASPAR yes 68072100
chr5 176411990 176412005 HNF4G JASPAR yes 68072101
chr5 176411994 176412000 LEF1 TRANSFAC yes 68072102
chr5 176411994 176412000 SOX10 JASPAR yes 68072103
Genes associated with rs575525346[chr5:176412000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More