EnhancerDB
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  3. rs575548893[chr17:76949613]
Enhancers that have rs575548893[chr17:76949613]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76939164 76975154 enh17420
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Ovary Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs575548893[chr17:76949613]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76945921 76950302 TCF7L2 GTRD no Colon (HCT116) 21795495
chr17 76946008 76950730 TCF7L2 GTRD no Colon (HCT116) 21795498
chr17 76948417 76950750 TCF7L2 GTRD no Colon (HCT116) 21795509
chr17 76948715 76950881 TCF7L2 GTRD no Colon (HCT116) 21795513
chr17 76949598 76949618 RREB1 JASPAR yes 56192917
chr17 76949601 76949621 RREB1 JASPAR yes 56192918
chr17 76949604 76949624 RREB1 JASPAR yes 56192919
chr17 76949606 76949626 RREB1 JASPAR yes 56192920
chr17 76949609 76949624 FOXP1 JASPAR yes 56192921
chr17 76949609 76949629 RREB1 JASPAR yes 56192922
chr17 76949609 76949630 IRF1 JASPAR yes 56192923
chr17 76949610 76949631 IRF1 JASPAR yes 56192924
Genes associated with rs575548893[chr17:76949613], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More