EnhancerDB
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  3. rs575568823[chr5:171592504]
Enhancers that have rs575568823[chr5:171592504]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs575568823[chr5:171592504]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171592495 171592510 TFAP2A JASPAR yes 67770338
chr5 171592495 171592510 TFAP2C JASPAR yes 67770339
chr5 171592496 171592507 TFAP2A JASPAR yes 67770340
chr5 171592496 171592507 TFAP2B JASPAR yes 67770341
chr5 171592496 171592507 TFAP2C JASPAR yes 67770342
chr5 171592497 171592506 TFAP2A JASPAR yes 67770343
chr5 171592498 171592513 RFX5 JASPAR yes 67770344
Genes associated with rs575568823[chr5:171592504], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More