EnhancerDB
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  3. rs575608780[chr1:41966987]
Enhancers that have rs575608780[chr1:41966987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs575608780[chr1:41966987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41966975 41966990 AR JASPAR yes 28396195
chr1 41966978 41966991 SMAD2 JASPAR yes 28396197
chr1 41966983 41967002 CTCF JASPAR yes 28396199
chr1 41966985 41966991 MZF1 JASPAR yes 28396200
chr1 41966986 41966995 ZEB1 JASPAR yes 28396201
chr1 41966987 41966997 TCF3 JASPAR yes 28396202
chr1 41966987 41966997 TCF4 JASPAR yes 28396203
chr1 41966987 41967002 TFAP2C JASPAR yes 28396204
Genes associated with rs575608780[chr1:41966987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More