EnhancerDB
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  3. rs575658400[chr19:5020056]
Enhancers that have rs575658400[chr19:5020056]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5019125 5039375 enh4975
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs575658400[chr19:5020056]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5020051 5020071 RREB1 JASPAR yes 112206051
chr19 5020052 5020061 SNAI2 JASPAR yes 112206052
chr19 5020052 5020062 ID4 JASPAR yes 112206053
chr19 5020052 5020062 TCF3 JASPAR yes 112206054
chr19 5020052 5020062 TCF4 JASPAR yes 112206055
chr19 5020056 5020076 RREB1 JASPAR yes 112206056
Genes associated with rs575658400[chr19:5020056], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More