EnhancerDB
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  3. rs575708484[chr17:27469162]
Enhancers that have rs575708484[chr17:27469162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27463605 27492255 enh4319
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs575708484[chr17:27469162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27466191 27469715 ZNF274 GTRD no Blood (GM12878) 21748769
chr17 27466191 27469715 ZNF274 GTRD no Blood (GM12878) 108246446
chr17 27469151 27469164 NFKB1 JASPAR yes 53716628
chr17 27469151 27469164 NFKB2 JASPAR yes 53716629
chr17 27469159 27469164 MYC TRANSFAC yes 53716630
chr17 27469159 27469171 GLI2 JASPAR yes 53716631
Genes associated with rs575708484[chr17:27469162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More