EnhancerDB
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  3. rs575765820[chr1:2216536]
Enhancers that have rs575765820[chr1:2216536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2213745 2234616 enh11425
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs575765820[chr1:2216536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2216531 2216537 GATA3 JASPAR yes 26231628
chr1 2216531 2216543 PKNOX1 JASPAR yes 26231629
chr1 2216531 2216543 PKNOX2 JASPAR yes 26231630
chr1 2216531 2216543 TGIF1 JASPAR yes 26231631
chr1 2216531 2216543 TGIF2 JASPAR yes 26231632
chr1 2216534 2216545 TBX20 JASPAR yes 26231633
chr1 2216534 2216545 TBX2 JASPAR yes 26231634
chr1 2216535 2216543 TBX15 JASPAR yes 26231635
chr1 2216535 2216543 TBX1 JASPAR yes 26231636
chr1 2216535 2216543 TBX4 JASPAR yes 26231637
chr1 2216535 2216543 TBX5 JASPAR yes 26231638
Genes associated with rs575765820[chr1:2216536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More