EnhancerDB
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  3. rs575818271[chr18:56518177]
Enhancers that have rs575818271[chr18:56518177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56508646 56521424 enh17749
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs575818271[chr18:56518177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56517520 56518190 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824419
chr18 56518101 56518238 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 21824426
chr18 56518170 56518184 PLAG1 JASPAR yes 110983634
chr18 56518171 56518185 PLAG1 JASPAR yes 110983635
Genes associated with rs575818271[chr18:56518177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More