EnhancerDB
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  3. rs57584819[chr6:41683420]
Enhancers that have rs57584819[chr6:41683420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs57584819[chr6:41683420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41683408 41683423 FOXP1 JASPAR yes 101668412
chr6 41683408 41683429 IRF1 JASPAR yes 101668413
chr6 41683409 41683424 FOXP1 JASPAR yes 101668414
chr6 41683410 41683425 FOXP1 JASPAR yes 101668415
chr6 41683410 41683431 IRF1 JASPAR yes 101668416
chr6 41683411 41683426 FOXP1 JASPAR yes 101668417
chr6 41683412 41683427 FOXP1 JASPAR yes 101668418
chr6 41683413 41683428 FOXP1 JASPAR yes 101668419
chr6 41683414 41683429 FOXP1 JASPAR yes 101668420
chr6 41683414 41683435 IRF1 JASPAR yes 101668421
chr6 41683415 41683430 FOXP1 JASPAR yes 101668422
chr6 41683418 41683433 STAT2 JASPAR yes 101668423
Genes associated with rs57584819[chr6:41683420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More