EnhancerDB
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  3. rs575942655[chr17:79015345]
Enhancers that have rs575942655[chr17:79015345]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79008825 79027145 enh17433
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs575942655[chr17:79015345]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79015331 79015352 IRF1 JASPAR yes 56300023
chr17 79015335 79015347 IRF1 JASPAR yes 56300024
chr17 79015335 79015349 IRF7 JASPAR yes 56300025
chr17 79015337 79015358 IRF1 JASPAR yes 56300026
chr17 79015341 79015361 RREB1 JASPAR yes 56300027
chr17 79015343 79015358 FOXA1 JASPAR yes 56300028
chr17 79015343 79015363 RREB1 JASPAR yes 56300029
chr17 79015344 79015350 TCF4 TRANSFAC yes 56300030
chr17 79015344 79015356 FOXI1 JASPAR yes 56300031
chr17 79015344 79015359 FOXP1 JASPAR yes 56300032
chr17 79015345 79015357 FOXC2 JASPAR yes 56300033
Genes associated with rs575942655[chr17:79015345], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More