EnhancerDB
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  3. rs575946828[chr17:70430323]
Enhancers that have rs575946828[chr17:70430323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs575946828[chr17:70430323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70430309 70430326 ESR1 JASPAR yes 55788100
chr17 70430312 70430333 ZNF263 JASPAR yes 55788101
chr17 70430319 70430331 HINFP JASPAR yes 55788102
chr17 70430323 70430331 SP1 TRANSFAC yes 55788103
chr17 70430323 70430333 SP1 JASPAR yes 55788104
Genes associated with rs575946828[chr17:70430323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More