EnhancerDB
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  3. rs575953657[chr15:40346275]
Enhancers that have rs575953657[chr15:40346275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40334765 40353183 enh16060
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs575953657[chr15:40346275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40344689 40349243 AR GTRD no Prostate (PC-3) 21649476
chr15 40344689 40349243 AR GTRD no Prostate (PC-3) 108133763
chr15 40345577 40346452 TCF7L2 GTRD no Colon (HCT116) 21649480
chr15 40346180 40346625 ZNF274 GTRD no Cervix (HeLa-S3) 21649481
chr15 40346180 40346625 ZNF274 GTRD no Cervix (HeLa-S3) 108133764
chr15 40346260 40346280 ESR1 JASPAR yes 22923807
chr15 40346269 40346280 EBF1 JASPAR yes 22923809
chr15 40346269 40346283 PLAG1 JASPAR yes 22923810
chr15 40346275 40346289 TLX1 JASPAR yes 22923811
Genes associated with rs575953657[chr15:40346275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More