EnhancerDB
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  3. rs575979696[chr17:38466661]
Enhancers that have rs575979696[chr17:38466661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38463228 38485935 enh4408
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
chr17 38466457 38466702 vista24696
VISTA
Transcript factors that have rs575979696[chr17:38466661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38463205 38467357 TCF7L2 GTRD no Colon (HCT116) 108254233
chr17 38463205 38467357 TCF7L2 GTRD no Colon (HCT116) 108254234
chr17 38463205 38467357 TCF7L2 GTRD no Colon (HCT116) 108254235
chr17 38464155 38467395 TCF7L2 GTRD no Colon (HCT116) 108254291
chr17 38464155 38467395 TCF7L2 GTRD no Colon (HCT116) 108254292
chr17 38464310 38467071 TCF7L2 GTRD no Colon (HCT116) 108254310
chr17 38464310 38467071 TCF7L2 GTRD no Colon (HCT116) 108254311
chr17 38464366 38466952 TCF7L2 GTRD no Colon (HCT116) 108254313
chr17 38464366 38466952 TCF7L2 GTRD no Colon (HCT116) 108254314
chr17 38466220 38466921 TCF7L2 GTRD no Colon (HCT116) 108254339
chr17 38466314 38466965 ZNF274 GTRD no Bone Marrow (K562) 21753570
chr17 38466314 38466965 ZNF274 GTRD no Bone Marrow (K562) 108254340
chr17 38466352 38467032 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21753571
chr17 38466352 38467032 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108254341
chr17 38466355 38467515 TCF7L2 GTRD no Colon (HCT116) 108254342
chr17 38466485 38466935 ZNF143 GTRD no Epithelial (MCF-7) 108254343
chr17 38466645 38466666 ZNF263 JASPAR yes 21233116
chr17 38466645 38466666 ZNF263 JASPAR yes 54203497
Genes associated with rs575979696[chr17:38466661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More