EnhancerDB
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  3. rs575990859[chr17:70396242]
Enhancers that have rs575990859[chr17:70396242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs575990859[chr17:70396242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70395579 70396246 EP300 UCSC Txn Factor no Conserved 108289837
chr17 70395617 70396775 TCF7L2 UCSC Txn Factor no Conserved 108289840
chr17 70395795 70396654 FOSL2 UCSC Txn Factor no Conserved 108289857
chr17 70395813 70396309 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21784541
chr17 70395813 70396309 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108289858
chr17 70395834 70396430 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21784543
chr17 70395834 70396430 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108289860
chr17 70395856 70396246 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784547
chr17 70395856 70396246 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289864
chr17 70395897 70396257 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784557
chr17 70395897 70396257 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289876
chr17 70395937 70396313 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784560
chr17 70395937 70396313 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108289880
chr17 70396027 70396437 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108289888
chr17 70396231 70396243 INSM1 JASPAR yes 55783365
chr17 70396231 70396246 NR2C2 JASPAR yes 55783366
chr17 70396234 70396244 SP1 JASPAR yes 55783367
chr17 70396237 70396243 NFE2 TRANSFAC yes 55783368
chr17 70396238 70396255 RARA JASPAR yes 55783369
Genes associated with rs575990859[chr17:70396242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More