EnhancerDB
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  3. rs576121541[chr16:1345646]
Enhancers that have rs576121541[chr16:1345646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs576121541[chr16:1345646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1344663 1346346 TCF7L2 GTRD no Colon (HCT116) 21684670
chr16 1345180 1348586 TCF7L2 GTRD no Colon (HCT116) 21684673
chr16 1345180 1348586 TCF7L2 GTRD no Colon (HCT116) 108171370
chr16 1345311 1345919 TCF7L2 GTRD no Colon (HCT116) 21684674
chr16 1345533 1347780 TCF7L2 GTRD no Colon (HCT116) 21684675
chr16 1345533 1347780 TCF7L2 GTRD no Colon (HCT116) 108171371
chr16 1345606 1348781 TCF7L2 GTRD no Colon (HCT116) 21684676
chr16 1345606 1348781 TCF7L2 GTRD no Colon (HCT116) 108171372
chr16 1345644 1345658 POU1F1 JASPAR yes 9149576
chr16 1345645 1345657 POU3F1 JASPAR yes 9149577
chr16 1345645 1345657 POU3F2 JASPAR yes 9149578
Genes associated with rs576121541[chr16:1345646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More