EnhancerDB
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  3. rs576188580[chr12:125093187]
Enhancers that have rs576188580[chr12:125093187]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125086525 125100115 enh2675
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs576188580[chr12:125093187]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125091897 125093893 TCF7L2 GTRD no Colon (HCT116) 21581213
chr12 125092128 125093572 P63 GTRD no Skin (Keratinocyte) 21581215
chr12 125092302 125093425 ZNF143 GTRD no Epithelial (MCF-7) 21581216
chr12 125092316 125093413 AR GTRD no Prostate (PC-3) 21581217
chr12 125092370 125093305 ZNF143 GTRD no Epithelial (MCF-7) 21581219
chr12 125092394 125093426 ZNF143 GTRD no Epithelial (MCF-7) 21581220
chr12 125092429 125093981 ZNF143 GTRD no Epithelial (MCF-7) 21581222
chr12 125092433 125094235 ZNF143 GTRD no Epithelial (MCF-7) 21581223
chr12 125092436 125094201 ZNF143 GTRD no Epithelial (MCF-7) 21581224
chr12 125092447 125094084 ZNF143 GTRD no Epithelial (MCF-7) 21581226
chr12 125092454 125094201 ZNF143 GTRD no Epithelial (MCF-7) 21581227
chr12 125092690 125094243 ZNF143 GTRD no Epithelial (MCF-7) 21581233
chr12 125092729 125093499 ZNF143 GTRD no Epithelial (MCF-7) 21581234
chr12 125092746 125093945 ZNF143 GTRD no Epithelial (MCF-7) 21581235
chr12 125092800 125093969 ZNF143 GTRD no Epithelial (MCF-7) 21581236
chr12 125092898 125093218 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581238
chr12 125092916 125093256 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581240
chr12 125092956 125093397 ZNF274 GTRD no Bone Marrow (K562) 21581241
chr12 125092959 125093388 ZNF143 GTRD no Epithelial (MCF-7) 21581242
chr12 125092968 125093278 ZNF143 GTRD no Epithelial (MCF-7) 21581243
chr12 125093017 125093583 ZNF274 GTRD no Bone Marrow (K562) 21581244
chr12 125093055 125093430 ZNF274 GTRD no Bone Marrow (K562) 21581245
chr12 125093107 125094083 ZNF143 GTRD no Epithelial (MCF-7) 21581246
chr12 125093181 125093193 PKNOX1 JASPAR yes 124398252
chr12 125093181 125093193 PKNOX2 JASPAR yes 124398253
chr12 125093181 125093193 TGIF1 JASPAR yes 124398254
chr12 125093181 125093193 TGIF2 JASPAR yes 124398255
chr12 125093182 125093192 NEUROG2 JASPAR yes 124398256
chr12 125093187 125093191 NFE TRANSFAC yes 124398257
Genes associated with rs576188580[chr12:125093187], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More