EnhancerDB
  1. Home
  2. SNP
  3. rs576245139[chr1:172864212]
Enhancers that have rs576245139[chr1:172864212]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs576245139[chr1:172864212]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172864190 172864499 ZNF274 GTRD no Cervix (HeLa-S3) 21350370
chr1 172864206 172864216 POU6F2 JASPAR yes 33162398
chr1 172864210 172864214 YY1 TRANSFAC yes 33162399
Genes associated with rs576245139[chr1:172864212], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More