EnhancerDB
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  3. rs576564216[chr1:202059492]
Enhancers that have rs576564216[chr1:202059492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs576564216[chr1:202059492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 21366733
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857749
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857750
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 21366741
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857760
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857761
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 21366754
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 107857776
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 107857777
chr1 202055723 202059518 ZBTB33 GTRD no Lung (A549) 107857811
chr1 202055981 202059502 ZBTB33 GTRD no Lung (A549) 107857835
chr1 202056230 202059570 ZNF143 GTRD no Epithelial (MCF-7) 21366805
chr1 202056230 202059570 ZNF143 GTRD no Epithelial (MCF-7) 107857843
chr1 202056377 202059551 ZNF143 GTRD no Epithelial (MCF-7) 21366818
chr1 202056377 202059551 ZNF143 GTRD no Epithelial (MCF-7) 107857859
chr1 202059490 202059505 FOXP1 JASPAR yes 34552321
chr1 202059491 202059506 FOXP1 JASPAR yes 34552322
chr1 202059492 202059507 FOXP1 JASPAR yes 34552323
Genes associated with rs576564216[chr1:202059492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More