EnhancerDB
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  3. rs576747020[chr16:88300591]
Enhancers that have rs576747020[chr16:88300591]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs576747020[chr16:88300591]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88298826 88300904 ZNF143 GTRD no Epithelial (MCF-7) 21735711
chr16 88298826 88300904 ZNF143 GTRD no Epithelial (MCF-7) 108221878
chr16 88299245 88300609 ZNF274 GTRD no Bone Marrow (K562) 108221887
chr16 88300586 88300591 SP1 TRANSFAC yes 12272110
chr16 88300588 88300603 TFAP2A JASPAR yes 12272111
chr16 88300588 88300603 TFAP2C JASPAR yes 12272112
Genes associated with rs576747020[chr16:88300591], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More