EnhancerDB
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  3. rs576841782[chr16:85430998]
Enhancers that have rs576841782[chr16:85430998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85422125 85439595 enh4173
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs576841782[chr16:85430998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85427696 85432177 TCF7L2 GTRD no Colon (HCT116) 21724944
chr16 85427696 85432177 TCF7L2 GTRD no Colon (HCT116) 108214333
chr16 85427899 85431855 ZNF143 GTRD no Epithelial (MCF-7) 21724954
chr16 85427899 85431855 ZNF143 GTRD no Epithelial (MCF-7) 108214341
chr16 85427941 85431397 ZNF143 GTRD no Epithelial (MCF-7) 21724961
chr16 85427941 85431397 ZNF143 GTRD no Epithelial (MCF-7) 108214347
chr16 85430221 85432005 ZNF143 GTRD no Epithelial (MCF-7) 21725027
chr16 85430232 85431393 ZNF143 GTRD no Epithelial (MCF-7) 21725028
chr16 85430250 85432221 TCF7L2 GTRD no Colon (HCT116) 21725029
chr16 85430271 85431248 TCF7L2 GTRD no Colon (HCT116) 21725030
chr16 85430306 85431339 TCF7L2 GTRD no Colon (HCT116) 21725031
chr16 85430331 85431882 ZNF274 GTRD no Bone Marrow (K562) 21725032
chr16 85430622 85431011 TCF7L2 GTRD no Colon (HCT116) 21725033
chr16 85430827 85431154 ZNF274 GTRD no Bone Marrow (K562) 21725034
chr16 85430934 85431243 ZNF274 GTRD no Bone Marrow (K562) 21725035
chr16 85430946 85431379 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21725036
chr16 85430991 85431000 THAP1 JASPAR yes 12056802
chr16 85430994 85430999 SP1 TRANSFAC yes 12056803
Genes associated with rs576841782[chr16:85430998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More