EnhancerDB
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  3. rs576916560[chr1:22589327]
Enhancers that have rs576916560[chr1:22589327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22573285 22604835 enh11598
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs576916560[chr1:22589327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22589308 22589327 RFX2 JASPAR yes 27356509
chr1 22589312 22589328 RFX2 JASPAR yes 27356511
chr1 22589312 22589328 RFX3 JASPAR yes 27356512
chr1 22589312 22589328 RFX4 JASPAR yes 27356513
chr1 22589312 22589328 RFX5 JASPAR yes 27356514
chr1 22589313 22589332 RFX2 JASPAR yes 27356515
Genes associated with rs576916560[chr1:22589327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More