EnhancerDB
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  3. rs577143046[chr1:10965427]
Enhancers that have rs577143046[chr1:10965427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
chr1 10965129 10966144 vista14
VISTA
Transcript factors that have rs577143046[chr1:10965427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10963814 10966661 ZNF274 GTRD no Blood (GM12878) 107686487
chr1 10965412 10965433 ZNF263 JASPAR yes 26759439
chr1 10965412 10965433 ZNF263 JASPAR yes 71121407
chr1 10965413 10965433 RREB1 JASPAR yes 26759440
chr1 10965413 10965433 RREB1 JASPAR yes 71121408
chr1 10965418 10965428 SP1 JASPAR yes 26759443
chr1 10965418 10965428 SP1 JASPAR yes 71121411
chr1 10965418 10965432 PLAG1 JASPAR yes 26759444
chr1 10965418 10965432 PLAG1 JASPAR yes 71121412
chr1 10965420 10965435 ZIC3 JASPAR yes 26759446
chr1 10965420 10965435 ZIC4 JASPAR yes 26759447
chr1 10965420 10965435 ZIC3 JASPAR yes 71121414
chr1 10965420 10965435 ZIC4 JASPAR yes 71121415
chr1 10965420 10965440 RREB1 JASPAR yes 26759448
chr1 10965420 10965440 RREB1 JASPAR yes 71121416
chr1 10965421 10965431 SP1 JASPAR yes 26759449
chr1 10965421 10965431 SP1 JASPAR yes 71121417
chr1 10965421 10965435 GLIS2 JASPAR yes 26759450
chr1 10965421 10965435 ZIC1 JASPAR yes 26759451
chr1 10965421 10965435 GLIS2 JASPAR yes 71121418
chr1 10965421 10965435 ZIC1 JASPAR yes 71121419
chr1 10965424 10965429 SP1 TRANSFAC yes 26759452
chr1 10965424 10965429 SP1 TRANSFAC yes 71121420
chr1 10965424 10965430 SP1 TRANSFAC yes 26759453
chr1 10965424 10965430 SP1 TRANSFAC yes 71121421
Genes associated with rs577143046[chr1:10965427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More