EnhancerDB
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  3. rs5773520[chr1:36633897]
Enhancers that have rs5773520[chr1:36633897]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36623405 36636370 enh239
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs5773520[chr1:36633897]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36633891 36633906 FOXP1 JASPAR yes 28122732
chr1 36633895 36633910 FOXP1 JASPAR yes 28122733
chr1 36633896 36633911 FOXP1 JASPAR yes 28122734
chr1 36633897 36633912 FOXP1 JASPAR yes 28122735
chr1 36633897 36633918 IRF1 JASPAR yes 28122736
Genes associated with rs5773520[chr1:36633897], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More