EnhancerDB
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  3. rs577402456[chr16:88370405]
Enhancers that have rs577402456[chr16:88370405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs577402456[chr16:88370405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88369785 88373141 ZNF143 GTRD no Epithelial (MCF-7) 21736132
chr16 88369946 88370739 ZNF274 GTRD no Bone Marrow (K562) 21736133
chr16 88370131 88370462 ZNF274 GTRD no Bone Marrow (K562) 21736134
chr16 88370150 88370587 ZNF274 GTRD no Bone Marrow (K562) 21736135
chr16 88370179 88370649 ZNF274 GTRD no Bone Marrow (K562) 21736136
chr16 88370221 88370679 ZNF274 GTRD no Bone Marrow (K562) 21736137
chr16 88370233 88371104 ZNF143 GTRD no Epithelial (MCF-7) 21736138
chr16 88370367 88371092 TCF7L2 GTRD no Colon (HCT116) 21736139
chr16 88370405 88370409 NFE TRANSFAC yes 12280309
chr16 88370405 88370410 GATA1 TRANSFAC yes 12280310
chr16 88370405 88370411 GATA3 JASPAR yes 12280311
Genes associated with rs577402456[chr16:88370405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More