EnhancerDB
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  3. rs577505599[chr5:78203837]
Enhancers that have rs577505599[chr5:78203837]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78196945 78218675 enh22385
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Blood (GM12878) Stomach Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs577505599[chr5:78203837]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78203829 78203841 PKNOX1 JASPAR yes 63632402
chr5 78203829 78203841 PKNOX2 JASPAR yes 63632403
chr5 78203829 78203841 TGIF1 JASPAR yes 63632404
chr5 78203829 78203841 TGIF2 JASPAR yes 63632405
chr5 78203830 78203840 MSC JASPAR yes 63632406
chr5 78203833 78203849 RFX2 JASPAR yes 63632407
chr5 78203833 78203849 RFX3 JASPAR yes 63632408
chr5 78203833 78203849 RFX4 JASPAR yes 63632409
chr5 78203833 78203849 RFX5 JASPAR yes 63632410
chr5 78203834 78203853 RFX2 JASPAR yes 63632411
chr5 78203836 78203851 RFX5 JASPAR yes 63632412
Genes associated with rs577505599[chr5:78203837], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More