EnhancerDB
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  3. rs577552139[chr17:77980112]
Enhancers that have rs577552139[chr17:77980112]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77955405 77983735 enh17427
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Blood (T-cell) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs577552139[chr17:77980112]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77979815 77980135 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108305900
chr17 77979863 77980139 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21796919
chr17 77979863 77980139 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108305901
chr17 77980100 77980114 TCF7L2 JASPAR yes 56237665
chr17 77980100 77980115 LEF1 JASPAR yes 56237666
chr17 77980106 77980126 TP53 JASPAR yes 56237667
Genes associated with rs577552139[chr17:77980112], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More