EnhancerDB
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  3. rs577579627[chr18:51917156]
Enhancers that have rs577579627[chr18:51917156]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 51910465 51921195 enh4845
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs577579627[chr18:51917156]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 51917145 51917166 IRF1 JASPAR yes 110715012
chr18 51917149 51917163 IRF7 JASPAR yes 110715013
chr18 51917151 51917157 TCF4 TRANSFAC yes 110715014
chr18 51917151 51917166 FOXP1 JASPAR yes 110715015
chr18 51917151 51917172 IRF1 JASPAR yes 110715016
chr18 51917152 51917161 SRY JASPAR yes 110715017
chr18 51917152 51917163 FOXP2 JASPAR yes 110715018
chr18 51917154 51917162 FOXO3 JASPAR yes 110715019
chr18 51917156 51917167 E2F6 JASPAR yes 110715020
Genes associated with rs577579627[chr18:51917156], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More