EnhancerDB
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  3. rs577820599[chr17:39932826]
Enhancers that have rs577820599[chr17:39932826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39926525 39940665 enh17154
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Lung Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs577820599[chr17:39932826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39932805 39932826 IRF1 JASPAR yes 54275008
chr17 39932816 39932835 PAX5 JASPAR yes 54275010
chr17 39932823 39932832 HIC2 JASPAR yes 54275011
chr17 39932825 39932845 ESR1 JASPAR yes 54275012
chr17 39932826 39932830 LFA1 TRANSFAC yes 54275013
Genes associated with rs577820599[chr17:39932826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More