EnhancerDB
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  3. rs5778743[chr1:172866786]
Enhancers that have rs5778743[chr1:172866786]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs5778743[chr1:172866786]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172866778 172866799 IRF1 JASPAR yes 33162822
chr1 172866779 172867319 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21350397
chr1 172866780 172866801 IRF1 JASPAR yes 33162823
chr1 172866781 172866802 IRF1 JASPAR yes 33162824
chr1 172866782 172866803 IRF1 JASPAR yes 33162825
chr1 172866783 172866798 FOXP1 JASPAR yes 33162826
chr1 172866783 172866804 IRF1 JASPAR yes 33162827
chr1 172866784 172866805 IRF1 JASPAR yes 33162828
chr1 172866785 172866800 FOXP1 JASPAR yes 33162829
chr1 172866785 172866806 IRF1 JASPAR yes 33162830
chr1 172866786 172866801 FOXP1 JASPAR yes 33162831
chr1 172866786 172866807 IRF1 JASPAR yes 33162832
Genes associated with rs5778743[chr1:172866786], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More