EnhancerDB
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  3. rs5779065[chr1:180556153]
Enhancers that have rs5779065[chr1:180556153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180547465 180559715 enh12426
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Thyroid Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs5779065[chr1:180556153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180554344 180556205 ZNF143 GTRD no Epithelial (MCF-7) 21353775
chr1 180554344 180556205 ZNF143 GTRD no Epithelial (MCF-7) 107847866
chr1 180554748 180556304 ZNF274 GTRD no Bone Marrow (K562) 21353804
chr1 180554748 180556304 ZNF274 GTRD no Bone Marrow (K562) 107847902
chr1 180555135 180556268 ZNF143 GTRD no Epithelial (MCF-7) 21353810
chr1 180555374 180556297 ZNF143 GTRD no Epithelial (MCF-7) 21353828
chr1 180555873 180556263 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353836
chr1 180556043 180556386 ZNF143 GTRD no Epithelial (MCF-7) 21353837
chr1 180556088 180556312 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21353838
chr1 180556095 180556288 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21353839
chr1 180556139 180556154 MEF2C JASPAR yes 33528824
chr1 180556147 180556168 IRF1 JASPAR yes 33528825
chr1 180556149 180556164 STAT2 JASPAR yes 33528826
chr1 180556152 180556167 FOXP1 JASPAR yes 33528827
chr1 180556153 180556168 FOXP1 JASPAR yes 33528828
Genes associated with rs5779065[chr1:180556153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More