EnhancerDB
  1. Home
  2. SNP
  3. rs578002617[chr17:75335839]
Enhancers that have rs578002617[chr17:75335839]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75332780 75369235 enh17400
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs578002617[chr17:75335839]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75335831 75335841 ID4 JASPAR yes 56069200
chr17 75335832 75335841 SNAI2 JASPAR yes 56069201
Genes associated with rs578002617[chr17:75335839], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More