EnhancerDB
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  3. rs5780292[chr1:205636656]
Enhancers that have rs5780292[chr1:205636656]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205631965 205647955 enh50152
Large Intestine Prostate (RWPE1) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs5780292[chr1:205636656]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205636649 205636664 FOXP1 JASPAR yes 34777553
chr1 205636650 205636664 GATA2 JASPAR yes 34777554
chr1 205636652 205636660 GATA3 JASPAR yes 34777555
chr1 205636655 205636661 TBP TRANSFAC yes 34777556
chr1 205636656 205636670 ONECUT2 JASPAR yes 34777557
chr1 205636656 205636670 ONECUT3 JASPAR yes 34777558
chr1 205636656 205636671 FOXP1 JASPAR yes 34777559
Genes associated with rs5780292[chr1:205636656], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More