EnhancerDB
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  3. rs578050922[chr18:56242671]
Enhancers that have rs578050922[chr18:56242671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56213245 56242835 enh4870
Astrocyte Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs578050922[chr18:56242671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56242662 56242673 HOXA10 JASPAR yes 110961754
chr18 56242663 56242673 ALX3 JASPAR yes 110961755
chr18 56242663 56242673 EMX1 JASPAR yes 110961756
chr18 56242663 56242673 EMX2 JASPAR yes 110961757
chr18 56242663 56242673 EN2 JASPAR yes 110961758
chr18 56242663 56242673 EVX1 JASPAR yes 110961759
chr18 56242663 56242673 EVX2 JASPAR yes 110961760
chr18 56242663 56242673 GBX2 JASPAR yes 110961761
chr18 56242663 56242673 HOXA2 JASPAR yes 110961762
chr18 56242663 56242673 HOXB2 JASPAR yes 110961763
chr18 56242663 56242673 HOXB3 JASPAR yes 110961764
chr18 56242663 56242673 MEOX1 JASPAR yes 110961765
chr18 56242663 56242673 MEOX2 JASPAR yes 110961766
chr18 56242663 56242673 MNX1 JASPAR yes 110961767
chr18 56242663 56242673 NOTO JASPAR yes 110961768
chr18 56242664 56242672 LMX1A JASPAR yes 110961769
chr18 56242664 56242672 LMX1B JASPAR yes 110961770
chr18 56242664 56242672 NKX6-1 JASPAR yes 110961771
chr18 56242664 56242672 NKX6-2 JASPAR yes 110961772
chr18 56242664 56242672 PDX1 JASPAR yes 110961773
chr18 56242664 56242672 VAX1 JASPAR yes 110961774
chr18 56242664 56242672 VAX2 JASPAR yes 110961775
chr18 56242664 56242672 VSX1 JASPAR yes 110961776
Genes associated with rs578050922[chr18:56242671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More