EnhancerDB
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  3. rs578053232[chr1:9899228]
Enhancers that have rs578053232[chr1:9899228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9892669 9907022 enh42876
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Stomach Muscle (A673) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Muscle (Myotube) Uterus Heart
Transcript factors that have rs578053232[chr1:9899228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9899212 9899228 RFX2 JASPAR yes 26684440
chr1 9899212 9899228 RFX3 JASPAR yes 26684441
chr1 9899212 9899228 RFX4 JASPAR yes 26684442
chr1 9899212 9899228 RFX5 JASPAR yes 26684443
chr1 9899213 9899232 RFX2 JASPAR yes 26684444
chr1 9899215 9899230 RFX5 JASPAR yes 26684445
Genes associated with rs578053232[chr1:9899228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More