EnhancerDB
  1. Home
  2. SNP
  3. rs578080428[chr5:171580332]
Enhancers that have rs578080428[chr5:171580332]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs578080428[chr5:171580332]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171580312 171580333 IRF1 JASPAR yes 67768684
chr5 171580326 171580332 HiNF-A TRANSFAC yes 67768685
chr5 171580328 171580341 POU2F2 JASPAR yes 67768686
Genes associated with rs578080428[chr5:171580332], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More