EnhancerDB
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  3. rs578082788[chr1:6338938]
Enhancers that have rs578082788[chr1:6338938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 6329205 6339045 enh11439
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs578082788[chr1:6338938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 6338034 6339651 TCF7L2 GTRD no Colon (HCT116) 107801900
chr1 6338931 6338951 TP53 JASPAR yes 26386048
Genes associated with rs578082788[chr1:6338938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More