EnhancerDB
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  3. rs578249146[chr16:1343655]
Enhancers that have rs578249146[chr16:1343655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs578249146[chr16:1343655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 21684544
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171314
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171315
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171316
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 21684584
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 108171336
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 108171337
chr16 1340953 1344322 TCF7L2 GTRD no Colon (HCT116) 21684587
chr16 1340953 1344322 TCF7L2 GTRD no Colon (HCT116) 108171341
chr16 1341352 1344675 ZNF274 GTRD no Blood (GM12878) 108171350
chr16 1341352 1344675 ZNF274 GTRD no Blood (GM12878) 108171351
chr16 1341745 1344089 ZNF143 GTRD no Epithelial (MCF-7) 21684591
chr16 1341754 1344034 TCF7L2 GTRD no Colon (HCT116) 21684592
chr16 1341814 1344359 ZNF274 GTRD no Bone Marrow (K562) 108171352
chr16 1341902 1345076 ZNF143 GTRD no Epithelial (MCF-7) 21684593
chr16 1341902 1345076 ZNF143 GTRD no Epithelial (MCF-7) 108171353
chr16 1341961 1344347 ZNF143 GTRD no Epithelial (MCF-7) 21684594
chr16 1341961 1344347 ZNF143 GTRD no Epithelial (MCF-7) 108171354
chr16 1342169 1344526 TCF7L2 GTRD no Colon (HCT116) 21684595
chr16 1342169 1344526 TCF7L2 GTRD no Colon (HCT116) 108171355
chr16 1342192 1344002 ZNF274 GTRD no Cervix (HeLa-S3) 21684596
chr16 1342221 1344278 ZNF143 GTRD no Epithelial (MCF-7) 21684597
chr16 1342259 1345522 ZNF143 GTRD no Epithelial (MCF-7) 21684598
chr16 1342259 1345522 ZNF143 GTRD no Epithelial (MCF-7) 108171356
chr16 1342303 1344026 TCF7L2 GTRD no Colon (HCT116) 21684601
chr16 1342330 1344057 TCF7L2 GTRD no Colon (HCT116) 21684602
chr16 1342339 1343742 ZNF143 GTRD no Epithelial (MCF-7) 21684603
chr16 1342362 1343893 TCF7L2 GTRD no Colon (HCT116) 21684605
chr16 1342415 1344263 ZNF274 GTRD no Liver (HepG2) 21684607
chr16 1342455 1343762 ZNF143 GTRD no Epithelial (MCF-7) 21684611
chr16 1342552 1343914 ZNF274 GTRD no Liver (HepG2) 21684614
chr16 1342660 1343683 ZNF274 GTRD no Liver (HepG2) 21684617
chr16 1342720 1343706 ZNF274 GTRD no Liver (HepG2) 21684619
chr16 1342723 1343751 ZNF143 GTRD no Epithelial (MCF-7) 21684620
chr16 1342724 1343824 ZNF274 GTRD no Liver (HepG2) 21684621
chr16 1342726 1343952 ZNF274 GTRD no Liver (HepG2) 21684622
chr16 1342744 1343690 ZNF274 GTRD no Liver (HepG2) 21684623
chr16 1342749 1344174 ZNF274 GTRD no Liver (HepG2) 21684625
chr16 1342749 1344394 ZNF274 GTRD no Liver (HepG2) 21684626
chr16 1342749 1344394 ZNF274 GTRD no Liver (HepG2) 108171357
chr16 1342767 1343662 ZNF274 GTRD no Liver (HepG2) 21684627
chr16 1342789 1343799 ZNF274 GTRD no Liver (HepG2) 21684630
chr16 1342801 1343778 ZNF143 GTRD no Epithelial (MCF-7) 21684632
chr16 1342829 1343741 ZNF274 GTRD no Liver (HepG2) 21684635
chr16 1342856 1343740 ZNF143 GTRD no Epithelial (MCF-7) 21684641
chr16 1342864 1343691 ZNF143 GTRD no Epithelial (MCF-7) 21684644
chr16 1342896 1343753 ZNF143 GTRD no Epithelial (MCF-7) 21684646
chr16 1342980 1343736 ZNF274 GTRD no Liver (HepG2) 21684651
chr16 1342997 1343757 ZNF143 GTRD no Epithelial (MCF-7) 21684654
chr16 1343056 1343807 ZNF143 GTRD no Epithelial (MCF-7) 21684657
chr16 1343154 1343704 ZNF274 GTRD no Liver (HepG2) 21684661
chr16 1343274 1343744 ZNF274 GTRD no Liver (HepG2) 21684663
chr16 1343353 1343711 TCF7L2 GTRD no Colon (HCT116) 21684664
chr16 1343478 1343975 TCF7L2 GTRD no Colon (HCT116) 21684666
chr16 1343571 1344558 ZNF274 GTRD no Bone Marrow (K562) 108171358
chr16 1343654 1343672 IRF2 JASPAR yes 9149250
chr16 1343655 1343659 TEAD2 TRANSFAC yes 9149251
Genes associated with rs578249146[chr16:1343655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More