EnhancerDB
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  3. rs57852004[chr12:47612444]
Enhancers that have rs57852004[chr12:47612444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47604098 47625535 enh2315
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr12 47612205 47612473 vista13270
VISTA
Transcript factors that have rs57852004[chr12:47612444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47612431 47612452 IRF1 JASPAR yes 82397425
chr12 47612431 47612452 IRF1 JASPAR yes 120685193
chr12 47612437 47612458 IRF1 JASPAR yes 82397427
chr12 47612437 47612458 IRF1 JASPAR yes 120685195
chr12 47612440 47612461 IRF1 JASPAR yes 82397428
chr12 47612440 47612461 IRF1 JASPAR yes 120685196
chr12 47612442 47612457 FOXP1 JASPAR yes 82397429
chr12 47612442 47612457 FOXP1 JASPAR yes 120685197
chr12 47612442 47612463 IRF1 JASPAR yes 82397430
chr12 47612442 47612463 IRF1 JASPAR yes 120685198
Genes associated with rs57852004[chr12:47612444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More