EnhancerDB
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  3. rs57942543[chr3:13007944]
Enhancers that have rs57942543[chr3:13007944]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 12983272 13008555 enh20346
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs57942543[chr3:13007944]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 13007931 13007945 PLAG1 JASPAR yes 516171
chr3 13007932 13007946 PLAG1 JASPAR yes 516172
chr3 13007939 13007948 SP1 TRANSFAC yes 516173
chr3 13007939 13007958 PAX5 JASPAR yes 516174
chr3 13007939 13007960 ZNF263 JASPAR yes 516175
chr3 13007940 13007950 SP1 JASPAR yes 516176
chr3 13007940 13007950 SP1 TRANSFAC yes 516177
chr3 13007941 13007951 SP1 JASPAR yes 516178
Genes associated with rs57942543[chr3:13007944], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 12775024 12810956 - TMEM40 ENSG00000088726.11 12810956 196988 Esophagus 0.319727 3420