EnhancerDB
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  3. rs57957409[chr17:39828259]
Enhancers that have rs57957409[chr17:39828259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs57957409[chr17:39828259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39827554 39828791 ZNF274 GTRD no Blood (GM12878) 21758223
chr17 39827554 39828791 ZNF274 GTRD no Blood (GM12878) 108259464
chr17 39828099 39828811 ZNF274 GTRD no Blood (GM12878) 21758224
chr17 39828099 39828811 ZNF274 GTRD no Blood (GM12878) 108259465
chr17 39828130 39828806 ZNF274 GTRD no Liver (HepG2) 108259466
chr17 39828142 39828877 ZNF274 GTRD no Liver (HepG2) 108259467
chr17 39828145 39828934 ZNF274 GTRD no Liver (HepG2) 108259468
chr17 39828166 39828678 ZNF274 GTRD no Liver (HepG2) 108259469
chr17 39828172 39828801 ZNF274 GTRD no Liver (HepG2) 108259470
chr17 39828195 39828762 ZNF274 GTRD no Liver (HepG2) 108259471
chr17 39828198 39828901 ZNF274 GTRD no Liver (HepG2) 108259472
chr17 39828201 39828869 ZNF274 GTRD no Liver (HepG2) 108259473
chr17 39828213 39828947 ZNF274 GTRD no Liver (HepG2) 108259474
chr17 39828245 39828266 IRF1 JASPAR yes 54271357
chr17 39828247 39828262 STAT2 JASPAR yes 54271358
chr17 39828248 39828262 STAT1 JASPAR yes 54271359
chr17 39828249 39828264 IRF9 JASPAR yes 54271360
chr17 39828249 39828270 IRF1 JASPAR yes 54271361
chr17 39828250 39828265 FOXP1 JASPAR yes 54271362
chr17 39828250 39828271 IRF1 JASPAR yes 54271363
chr17 39828251 39828272 IRF1 JASPAR yes 54271364
chr17 39828252 39828267 FOXP1 JASPAR yes 54271365
chr17 39828252 39828273 IRF1 JASPAR yes 54271366
chr17 39828253 39828274 IRF1 JASPAR yes 54271367
chr17 39828254 39828269 FOXP1 JASPAR yes 54271368
chr17 39828254 39828275 IRF1 JASPAR yes 54271369
chr17 39828255 39828270 FOXP1 JASPAR yes 54271370
chr17 39828255 39828276 IRF1 JASPAR yes 54271371
chr17 39828256 39828271 FOXP1 JASPAR yes 54271372
chr17 39828257 39828272 FOXP1 JASPAR yes 54271373
chr17 39828258 39828273 FOXP1 JASPAR yes 54271374
chr17 39828259 39828274 FOXP1 JASPAR yes 54271375
Genes associated with rs57957409[chr17:39828259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More